Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr17_0261700

Sequence Length

470 nt

GC Content

0.4660

GUCAGAGUCUCUUUCUCUUCACACUUAGCUUUCUGGACUGGUGCUUUGGGCUCCUUUGUGGCCCGCUUCUUACGCUUAGGUGGCUCUACACUCUUCCUACGACCUCUUGUAGUUCUGGGAGUAGGGGAAGUGGUAGCUGCGGCAACAGAGGCAGCUCUCCUGGUUCUCCUUUGUGUAACGCUGACUUUCUCUACUAUCUUCUCCUUUUUCUUCUGCUUUUCAUUCUCUCCAUAGUCAUUGCUGUCAUCUGUGGCCUCUUCCUCACUCUCUUCCUCUUCCUCCUCACUGCUUGUCUUAAGAACAGGAGUCUCUUUGGACUGAGAAGAGACACCCUUUUCCCCUUUAGAUACAUUUAAUGUUUGAUUAUUAAGGUUUACCUCCACUAUGAUCUGCUCCCUUUUGUAAGAGACUUCUUCCUCUUCCUCCUCUGUGUCAUCAGAAUUCUCCCGGUCUUCCUUAACAGCAUGCAC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-100.54 kcal/mol

Ensemble Metrics

Free Energy: -110.29

Frequency: 0.0000

Diversity: 123.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

...((((.......)))).........(((....(((..((((....((((((((..(((............)))..))).)))))..))))..)))...((((....(((((...(((((.((((((((.(((((..(.(((.(((((((((((......((....))...(((...)))(((((..............................................)))))..)))))).))))).))).)...)).)))..))))))))..))))).))))).(((((...(((.(((.((((((((.......))))))))..))).)))......)))))............((((((...((.......))...))))))(((........)))((((........))))......((((......))))........)))).........)))......

Thermodynamic Ensemble Prediction

,,.((((.......)))).........(((,,..(((((((.,....(((((.....,.))))){{,.,,,,.},..|||{|,,....}}},....((((((....})))))....((((({(((((((({(((((..({({{.(((((((,(((.,....|},...))}}}}},...))).|.......}}}}}}.}}}}}}}.........................,,,||,,,..}}|||,,|}||}||,,..........(((((({{((.(((.....{((.((((({....},}))))))}......)))..)))))))))........,,.,}..,|||,|||,..,}}},..((((((..,((.......}}...)))))),))))))....|.{((((........))))}.....((((......))))......))))))}........)))......