Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr17_0261900

Sequence Length

353 nt

GC Content

0.3654

GUAUGAAUAAAUAGUCUAAAACAAAAAUAUUUGAAACCAGGUAGGAAGUUUUAACCCAAACAUAAUGUAUGCAAAACAUAGCCAACAGAAAAAGACAAAUUGCUAACACACCUCUGCCUUUUCCUUCCCAUAAGCCUGUAUGUUCCCUCUCCGAUUCUUUUGAAAUAUACAAAUCCUCUCUCUCCCAAAAGGAACACACACAAUUUUACAAACAAUUUCAAGGGAUCCACCUAUUCCCAGAAAUCCAUCCAAGGAUUCUCUAGGGGUCCCAAAACCCCAGGCUAAAAACUCUCAUCACAGAGCAGAUUUUACCUUUCCUUGUGAUAUAUAUUUAACUUUUUUUGAAGACAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-53.70 kcal/mol

Ensemble Metrics

Free Energy: -59.94

Frequency: 0.0000

Diversity: 72.03

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.((....(((.(((((((((.....((((((....))))))....))))).............(((..((........))..))).....))))..))).....)).))(((((.((((...............(((.((((((...........(((((.......................))))))))))).)))..............(((((..((((.........)))).)))))..(((((((((.......(((((......)))))(((.(((((.(((((......))).)).)))))))).)))))).)))..................)))).)))))

Thermodynamic Ensemble Prediction

((.((....,,,.(({((((((.....((((((....))))))....))))),............{((..((........))..}}}.....}}})...}},....)).))(((((.((({..........,{,..((({((((,,......,......,.}}}}}}}}}}.................,}))),,,..,................,,,,..((((.........)))){|||{({(.....,})}}}.},,.(((((......)))))(((.(((((.(((((......))).)).)))))))).,,})))})},..................)))).)))))