Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr19_0142800

Sequence Length

238 nt

GC Content

0.4622

GUAAUCCUUUUUAGAAGGCAAGCCUCAUUCAGGCAGCAAACUACAGGACUACUGUUUUUGGCUACAGACAAGAAAAUAUUCCACUUAACUUGGUUCCACUGAGAAUUUUGAACUGUACUCUGUAACCAUCCCAAACUCUUCCCAGCUACAGACUUGGGGAGGUUCUGCCCUUCCAGAGGCCUGGAGGAAGACACCCAUUUAUAGCCAUGCAGCAGGCCUGCAGACUUUGGCCUUUACU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-53.50 kcal/mol

Ensemble Metrics

Free Energy: -59.18

Frequency: 0.0001

Diversity: 51.44

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..(((((...)))))...((((.....))))........((((.....))))...((((((.(((......................(((((..((.(((.((........)).))).))))))).....(((.((((((((........))))))))))).....(((((((....)))))))..........))).)))))))))((.(((((..........)))))...))

Thermodynamic Ensemble Prediction

({(..,,,{|.,,|||||{..((((.....))))..{,,,{{,((({.,,.||||...((((((.{{,...{,.....,}}.........(((((..({.(((.((........)).))).)}))))).....,{{.((((((((........)))))))))}|{{..,(((((((....))))))).}},......,,,.)))))),))||.||{||}}.,,...,,))))),..))