Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr1_0871500

Sequence Length

294 nt

GC Content

0.4286

GUGGAAAGAAUGUCUGCUGCCAAAACUCACAGUGACCAAAUUUUACUUCUUGAGCUGUGUUCUUCCCAUAGAAGUUUAUUCUGGGGCCCUCAGGUAAGAAGCCCAAGGGCUUCCACCUCCUGUUUUGAUUGUCUAAAAACCAUAAAAAAAUGACUUAUCUUCCACCUACUAAAGAUGUUGAAAAUCAAUUACCUGCUUGAAGCAAUGGACAGGCGCUGGGACUGAACAUGUUUCUUUUAGGUAUUUGUCCCAGGUAAAAUGACCUAGAGGUGACCCCAUGAUGGAGCAGGGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-68.90 kcal/mol

Ensemble Metrics

Free Energy: -75.59

Frequency: 0.0000

Diversity: 101.43

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..(((...))).))))(......((((((...(((..........))).))))))...(((((.......((((((.((((((((((((((..((((((....)))))).))))...(((((.........)))))(((......)))...((((((..........))))))........(((.((((((...((((((.((..(((.(.....).)))..))))))))...)))))).)))....((((......)))).)))).).))))).))))))...))))))

Thermodynamic Ensemble Prediction

((((({{({..,||,,{,,.,......(({(((,,...........,..,}},)}}}}),,,,,(((..{(({.....)))))))(((((.,(((..,,,|||..}}))))))})){{{{{((({{{{{.{{{..................)}}..|||||.|{|{{.....,},,|,,{,...,|||.((((((...(((((,,((..(((.{.....}.)))..))))))))...)))))).}}}.,,,{(({......)))),)))),).},||}.,,})))))))),.))