Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr22_0199500

Sequence Length

296 nt

GC Content

0.3784

GUGAGCACACACGUGGCACCUGCUCUAAAUGCUACUUUCUCCUAGAAAGAUUCCAUUUACAGAAGAGAAUGUUUUGGACUGAGAGCAAAAUCUCAACUGGUCAGGAAUGGGUUUAAUUCCAAAUGACAUUUUAUGGGUAACUACGAGAAACCUUUUAUAGAACACAGGCUAUCUUCCUGCUUUAGUAAAUAGCUCAGGGUUUUGAGUAAACUGAUUGUUUUCCGUUGUCUUAGAGUUAUGAUUCUGUAUUAAGAGUAUUCUUGUAAGACACGAGGAAGAGACUAGGCUUUAUCAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-62.00 kcal/mol

Ensemble Metrics

Free Energy: -68.20

Frequency: 0.0000

Diversity: 87.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((......((((((...........))))))((((((.(((......(((((...(((..((((.((((((......))))))...))))..)))(((((((((.......)))))...)))).....)))))...))).))))))...(((((.(((..((((.......)))).))).)))))..)))))...)(((((..((.((...(.((((((..(((((((.((..((.(((((......)))))))..)).)))))))...)))))).)...)).))..)))))

Thermodynamic Ensemble Prediction

((((((......{{(({{..{|,,.{{{{||,,||(((((...}))))}.,,,||}}}}(((..((((.((((((......))))))...))))..)))(((((((((.......}))))...)))).....,|||||..}|},},}|,|,||{{{{{,|{,..((((.......}))).}}}.}}},,..)}}}),..){||{{,|{{,((...,.((((((..(((((((.((..,..(((((......))))),,.,)).))))))).,.)))))).}.,,)).)},.)})))