Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr22_0200000

Sequence Length

250 nt

GC Content

0.3080

GUUUUAAUGACCAUGCAGAGACAGAGCAAGGCCUCUGGCCCUCUAGACAGAUCAGUACUUAAGGACUCUGGACAGUGUCACUUGUGACUGUAAUCAUUUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUGAAAAUUUUAUAACAAUUUUUUCCCUUGUAAGUUUUAUAAGACAAGUGUAAUAUACAUGUGAGCAUGAUAACUGCUUACAAUUUAAUAGGCCGGGCACG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.30 kcal/mol

Ensemble Metrics

Free Energy: -42.24

Frequency: 0.0003

Diversity: 53.60

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.....)))(.(((((((.(((((......)))))...)))).....(((((((.(.(((((((.((....)).))).)))).)))))..)))........................................................(((((..((.....))..))))).(((((((...))))))).(..((.((.((....((((((((.......))))))))...)).)).))..)))).)

Thermodynamic Ensemble Prediction

(((,....|}}{.{{{,|||.|{{,(,..{{{|||||{,,}}}},|,..({{((((.{.{((((((.((....}).))).)))).}))))..,})........................................................(((((..{,.....})..))))).(((((({...}))))))....{(((,..,})),{(((((((.......)))))))}.......,)))},.)),.)