Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr2_0855000

Sequence Length

288 nt

GC Content

0.3576

GUAUUGAAUCAUCACUAAAUAAGUCAACUGGUUCAGAAUCAGGUGAGGAAUCUUCAACUAGCUCAGAAUGAUCAGGCACUGGCUGUUCAACUUUUGCCAUUUCUGAAUAAUCAGAGAAAUCCGGAGCUGGUUCAGCAGAAAGCUUUGUUUCUUUAAUUAAAUCACAUGCAAUAGAUAUAUAAGGAGCUUCUGUUUCUUGAAGAGCUGCAUUAAUAUUUUCAGGCUCUUUAAUUUCUUCCUUUAUUCCUGAUACUUUUUUUAGUGAUACACUCAUGGCCUCUUCAUAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.40 kcal/mol

Ensemble Metrics

Free Energy: -70.15

Frequency: 0.0000

Diversity: 51.15

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..(((...(((((((((.((((.............((((((.((((((.....(((((((((.((.......((((..((........))..)))).(((((((....)))))))..))..))))))))).(((((((.(((((((.(((....................))).)))....)))))))))))..((((((((((...............))))))))))....))))))....))))))))))..)))))))))....)))..))(.........)

Thermodynamic Ensemble Prediction

((..(((...(((((((((.(((,.....(..,||{{(({(((.((((((.....(((((((((.(,.,,,.,,({(,..{{},,.,,..,,..,}}}.(((((((....)))))))..,,..))))))))).{((((({{((((({{.(((....................))).,,,...}))))))))))}..((((((((((..,............)))))))))).,,,)))))).}}})))))}})))..)))))))))....)))..))(.........)