Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr5_0228000

Sequence Length

250 nt

GC Content

0.3320

AUCAAUAGGGGUCAGGGGAUAUCUUUCAUGAGGUUCCAGCACAAACACAACAAAAUGCAGCAGCCAAAUCACAAAAAAAAAAAGAAAAAAAAGUUGUGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACUGCUGGGAUUACAGGCAUGAGCCACCGCGCCCGGCCUAUAUUCUCCUUUGUAAAAGACACUAACUGGAAAACAGCCUUUACUCAUCUUCUUAUCUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-32.20 kcal/mol

Ensemble Metrics

Free Energy: -35.02

Frequency: 0.0103

Diversity: 36.73

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((......)))(((((((..........((((((((((.................((....))....((((((...................))))))........................................................((((((......(((....)))......)))))).((((........))))...........))))).....))))).........)))..))))

Thermodynamic Ensemble Prediction

(((......)))(((((((..........((((((((((.................{{....}}....{(((({...................)))))}........................................................((((((......(((....)))......)))))).,.,,......,.|}|...,,.......))))}.....))))).........}}}..})))