Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr6_0218000

Sequence Length

240 nt

GC Content

0.2875

GUUUAGCAUAAAAGCAUAUUAACUUGCUUCACAGUUUACAAAGUAUACUUUCUUACAUUAUCUGGCCUGAUUUUCAACACAAUUCUAUGCUGUAAGAAGAAUGGGUAUUAUUUACAUUUCAUAAAGAAACUGAAAUUAGAGCAUUUAAAUGAUUCACAUAAAGUUAUUUGGCCAGUGAAUGACAGAGACUGAAAUAAAUUACAAAUUUAUUCAUUCAUCUACUGAAAAUUUAGGUACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-31.50 kcal/mol

Ensemble Metrics

Free Energy: -38.29

Frequency: 0.0000

Diversity: 83.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.........(((((........)))))...(((.(((...))).)))..........))(((((((((((((((........((((.((......)).))))(((.....)))((((((.........))))))..((((((....))).))).......((((((((.....))))))))(((((.((((.((((((...)))))))))).)).)))..)))))).)))))..))))

Thermodynamic Ensemble Prediction

((..,{,....(((((........))))}...,||,.||...|||,.}},,....|,,,}}(((((((((((((({......,,{{{{,((.,,,..}|,||||{{,...,,||}{((((,....,,...}}}}})}},}||}}..|||||{||,......,|||||||}},,,}}})))),,{{{({.(({{(((((({...}))))))))).)).)}}..})))}},}})))..))))