Sequence Details

BLAST PRIMER
Symbol
hsa_chr6_0218100
Sequence Length
372 nt
GC Content
0.3575
CCACCCCAAAUCUUCUAACAUUUCACCACUGAAGGAUGACUCCACCAGAAUACCCUUGUCACAAAUACUCAUCGGUUCUUUUUUUUGUUUCUCUACAUCUUCACCUUUUGAAUGAACAUAAAUCAGGAACUGAUUGCUUGACUCUGAACUCAUCAAUGUAAUACUCCUUUCGGAAAAAUUUUCAAUUAAACUCUGUGCAGGAAGAAGCUGAAGAGUUAAUUCUCCUAGAAAUGCUUUCCAGGAAUUAUCAAAAUGAUAGGGAGAAAUCACAAUAUUUAACUUUACAGACAAAGGGGAAAAAAUACCAACAGUCUCUUCUUUUUCAAUUGGUUUUGAGAAGCUCACCACUUUUGAACACCUCUUCUUAUCUCU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-55.00 kcal/mol
Ensemble Metrics
Free Energy: -62.32
Frequency: 0.0000
Diversity: 96.08
Structure Visualization
Structure Prediction
MFE Structure Prediction
...........((((...............))))..((((((...(((......((((.((((.........((((((((.(((.(((((.((................))..))))).)))..))))))))(((((((((...((....)))))).)))))..(((....)))...................))))))))......)))..))))))....((((.((((...)))).))))...........((((((((((......................((.((((((((................)))))))).))....(((.((.(((((.......))))).)).)))))))))))))...
Thermodynamic Ensemble Prediction
...........,,,,.......,......,}}}|{{{{{,||,..|||......{{{(|{{,,.......{(((((((((.{((,(((((.,,...............,))..))))).)))..)))))))))}{{{{{{(...{{....,,)))}.))},...(((....))}.........,{{{,,,{{{|,,||||,.....,)}}.}))))))}}}.((((.((({...}))).))))..,,,......||{{{(((((......................((,{{{{((({.............,,.)}}}}}}},||,,..(((.{(,(({{{.,.....))})),)).}}}})))))))))...
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