Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr6_0280700

Sequence Length

250 nt

GC Content

0.2480

GUGCAAAGUUAUAAUGAGAUGACUGUCAUCUGCAAAGGCGAAUCACUCUUUCAAAAAAGAUUAAAUUCCAUGUAAAUAAUGCCAUUUCUUGUUCCAACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAAUUUAGAUCUAGGAUUUUAUAAAUGUCUAUUAAACAUAUUCUGUAAACCAUGAGCUAUUUAACAAUAUAUUUUAAAAUGCCUAAAUAGGCCGGGCGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-21.10 kcal/mol

Ensemble Metrics

Free Energy: -25.84

Frequency: 0.0005

Diversity: 48.55

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((...((((((......))))))..)))((((...(((((((...(((((....)))))....))))(((.......))).......((((....)))).............................................................((((((((((.((((((...(((((....(((((.....)).)))...)))))....)))))))))))).)))).....)))..)).))

Thermodynamic Ensemble Prediction

(((...((((((......))))))..)))((((...(((((({...(((({....}))))....}})){{{,......,}}..,....{{({....,,},...........................................................,.((((((((((.((((((...{{{{{.,,,{(({{.....},.))}.,,}})}}....)))))))))))).)))).....)))..)),))