Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr6_0687200

Sequence Length

180 nt

GC Content

0.2778

GUGAUUGAUUCCUUUAAUUUCUAUAUUCUCUAGUAACUGCUCUGAAUAGAAAUAAAAUUAAACAGAAAUAGGUUUUCCCUUAGUCAUUUAUACUCAUUGUAUAAGUGACUUUUUGAUGAAAAAGAAAUUAAAAACAUUUUCCUAGAAACAAAUGUUAAUAUAGGCUGAACCAGAGGGCAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-26.30 kcal/mol

Ensemble Metrics

Free Energy: -30.58

Frequency: 0.0010

Diversity: 44.53

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((..((((((.((((((((..((...(((....)))..)))))))))).................(((((..(((.((((((((((((.....)))))))))))).((((((.........))))))(((((((..........))))))).....)))..))))))))))))).

Thermodynamic Ensemble Prediction

.....((,,,(((({.((((((({.{((,,.(({....}}}..)))))))))).................(((((..(({.((((((((((((.....)))))))))))){((({{{.........)))))}|((((((,,...,,,..,}))))}.....)))..)))))}))))),),