Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr8_0027900

Sequence Length

209 nt

GC Content

0.3349

GUUAGAAACAUUUACAAUUUACUAAUAUCCUGUAUUUCCAUAAGUAUCUAUGGAUAUGCCAUCCAGCAGCAAUCUGCAUUCCCUUUUAUCAGAGAACACAAAUACAGUUGAUUCUUAUUAUUUGCAGACCAUUUACGUGUUGUAUAAAAUUGCUAUAAACCAUGAAUUAGCAAAUACUGAACUACUGCUCCCAGGGAGGAAUAUAUAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-31.90 kcal/mol

Ensemble Metrics

Free Energy: -36.39

Frequency: 0.0007

Diversity: 39.74

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((................)))..))(((((((((((...........(((((.....)))))((((....))))..(((((.....(((((..((........((((((((...((((..((((......(((.....))).....)))).)))).....))))))))......))..)).))).....))))))))).)))))))

Thermodynamic Ensemble Prediction

(((((,{,.........,}}.))),.,)(((((((((((...........(((((.....)))))((((....))))..(((((.....(((((..,,,.......((((((((...,{,,..((((......(({{...,))}.....}))).|,,,.....)))))))),,.,..}}..}}.))).....))))))))).)))))))