Basic Information
Symbol
CLIC3
RNA class
mRNA
Alias
Chloride Intracellular Channel 3
Chloride Intracellular Channel Protein 3
Glutaredoxin-Like Oxidoreductase CLIC3
EC 1.8.-.-
Location (GRCh38)
9:136994608-136996568
Forensic tag(s)
-
MANE select
Transcript ID
NM_004669.3
Sequence length
809.0 nt
GC content
0.6749
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-343.60 kcal/mol
Thermodynamic ensemble
Free energy:
-357.00 kcal/mol
Frequency:
0.0000
Diversity:
226.42
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((...((((.((..........(((((((....(((....)))(((((((..((((.(((((..(((((...(((.((((....)))).((((..(((((..(((....((.(((((.((....))((((....((((((........)))))).))))))))).))..)))..))))).))))...)))))))).))))).((((..(((........))).))))..))))..)))))))..(((((((.(((.((((((((((((((.(..(((((((..(.....)..)))))))....).))))....))))))))))......((((((.(((..(((((......(((((.((((..((((........))))..)))).))))))))))..)))....((((((((.(.((.((((((((((.((.(...(((.((.((....))....))))).).)))))))))))).)))))))))))(.(((((.((((((((.....))).)))))...))))).))))))))))))))))))))).)))...((((((((((((....)))))))))).)).)).))))))))))).....(((((((.(.(((((((((...((((((.((.((((.((((..(((.(((.(....((......))...).))))))..))))...).))).)).))).....))).))))))))).).))))..(((((((((((((((...(..(((.......)))..)..)).)))).))).)))))).............))).
Thermodynamic Ensemble Prediction
(((((((...((((.((,,.,......{((((((.....,||,|,|||(((((((..(((({{(,(((((,((((((((((((((,..,|||,....,},},}||}))}}}}.},}))))}})},,,..(((((...((((((....({{..(((.((((.{.....})))))))...))).))))))....))))).,(((,....,,,)}}..{{{{({,....}.))),),,)))..))))))),.||||{||.{{{.((((((((((((((.(.,(((((((..{.....}..)))))))....}.))))....))))))))))......({(({{..,|.,|..........|{|||}|{|({{(,{{..,,,,..||}|,.||||{|||,,,.{{{.,{{{.,,,(({{{{{(,(.((.{{{{|||||||||,|,,,|||.||,||},,.}).,,.))))).}.})))||||||||.||,||||||||(.(((((.((((((((.....,)).)))))...))))).}))})))}}}))))}))}}})})))...(({(((((((((....)))))))))).}}.,}.))))))))))).....,,,((((.(.(((((((((,,.((((((,.,.((((.((((..(((.(((.(..,.((......)).,.).))))))..))))...}.)))}))}))).,,..}},.))))))))).).))))..(((((((((((((({...(..(((.......)))..}..}).)))).))).)))))),{,.........,))).
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| GCGCCUGACCGCGGCAGCUCCCACCAUGGCGGAGACCAAGCUCCAGCUG… | 809 nt | 0.6749 |
Summary
Chloride channels are a diverse group of proteins that regulate fundamental cellular processes including stabilization of cell membrane potential, transepithelial transport, maintenance of intracellular pH, and regulation of cell volume. Chloride intracellular channel 3 is a member of the p64 family and is predominantly localized in the nucleus and stimulates chloride ion channel activity. In addition, this protein may participate in cellular growth control, based on its association with ERK7, a member of the MAP kinase family. [provided by RefSeq, Jul 2008]
Forensic Context
No relevant information is available at the moment.