Sequence Details

BLAST PRIMER
Symbol
NM_001352331.2
Sequence Length
460 nt
GC Content
0.5435
AUUGCGUAGUUCCGAAUACCCUCGGCCACACCUGGCCUUCUCCAUGCUCGGAAUAACUUCCUGCAGCGACCAACAGGCUAAAGAGGGGGAAGGUCUGGAGGGAUCCAGCACCGGCUCCUCCUCCGGCAACCACGGUGGGAGCGGCGGAGGAAAUGGACAUAAACCCGGGUGUGAAAAGCCAGGGAAUGAAGCCCGCGGGAGCGGGGAAUCUGGGAUUCAGAACUCUGAGACGUCUCCUGGGAUGUUUAACUUUGACACUUUCUGGAAGAAUUUUAAAUCCAAGCUGGGUUUCAUCAACUGGGAUGCCAUAAACAAGGACCAGAGAAGCUCUCGCAUCCCGUGACCUCCAGACAAGGAGCCACCAGAUUGGAUGGGAGCCCCCACACUCCCUCCUUAAAACACCACCCUCUCAUCACUAAUCUCAGCCCUUGCCCUUGAAAUAAACCUUAGCUGCCCCACA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-149.70 kcal/mol
Ensemble Metrics
Free Energy: -157.74
Frequency: 0.0000
Diversity: 108.69
Structure Visualization
Structure Prediction
MFE Structure Prediction
....(((.((((((.........(((((....)))))...((..(((..((((....)))).)))..))((....)).....((((((((.((((((((....))))).)))...))))))))))).))).)))(((((.(((((.((((....((........))((((((((..((..((((.......(((((....))))).((((((((.(((.....((((.((.(((...((((((((........((...(((((((.........(((((((...)))))))((((......))))((........)).)))))))...))..)))))))).))).))))))....))).).)))))))(((.(((((........))))))))...........))))))..))))........))))................)))).)))))))))).
Thermodynamic Ensemble Prediction
....(((.((((((.........(((((....))))).......{((..((({....}))).)))|,}.{{....)),....((((((((.((((((((....))))).)))...))))))))))).))).)))(((((.(((((.((((....((.,.....{||{(((,,,,..,|}},|||..,,...{|{{(,,,.|||||,,,{(((({,{({((....}|||({,{(((,{.{((|{(({.......}}}}.}}|||||,,},.....,{(((((...||}}}}}..{{,..,(((((((...............((({...))))))))))))}}}.{{{{......)))).,.))))}})(({,(((((........)))))}}}...........,}}))),,,,,}.,,}}}}}),))}})},},,,.......)))).)))))))))).
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