Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_004607.3

Sequence Length

661 nt

GC Content

0.3964

CUAAAUAGCCGCAGCCUCUGCGCGUCGCCCUCCACGGUUACCCCGGCUCUCCGCCCCUCCUUCUCGCGGCGCUCGAGGGACCAUGGCCGAUCCUCGCGUGAGACAGAUCAAGAUCAAGACCGGCGUGGUGAAGCGGUUGGUCAAAGAAAAAGUGAUGUAUGAAAAAGAGGCAAAACAACAAGAAGAAAAGAUUGAAAAAAUGAGAGCUGAAGACGGUGAAAAUUAUGACAUUAAAAAGCAGGCAGAGAUCCUACAAGAAUCCAGGAUGAUGAUCCCAGAUUGCCAGCGCAGGUUGGAAGCCGCAUAUUUGGAUCUUCAACGGAUACUAGAAAAUGAAAAAGACUUGGAAGAAGCUGAGGAAUAUAAAGAAGCACGUUUAGUACUGGAUUCAGUGAAGUUAGAAGCCUGAAACUUUUCUCGUAUGGGGUGGUUUUUGCAUUAAAUCCUGGGGUCCAUUUUACAAUCCAUUAUUUUUGACCACUGCUAUGUGUUCAAGUAGUAUGAGAAUGUGAUUGUUUUUAUCUGGUUACAUAUAUAUUUCUUUGUCUAAUUUAAUAUGUCAAAUAAAUGAGUUCAUCUAAUAAAAUUGUUUAUUUUAUACUUUACAAAAUUUUUAAAUUAACCUUUUAUCAUUAAACCACAUAGACUUUAUGACAGAGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-142.8 kcal/mol

Ensemble Metrics

Free Energy: -155.81

Frequency: 0.0000

Diversity: 236.2

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......(((((((...))))).))....(((((.(((..(((((((...((((...........)))).)).)).)))))).))((((.((......(((......))).......)).))))(((((((((.(((((((..(((((...((((.((((((((...((((((.......(((.(((...(((.....(((....((((....))))....))).((((((...(((..(((((((((............((((((((..((((((((....(((((....)))))..(((.(((((((((((((.....)))).))))..........((.(((.....)))))((((((.....((..((...((((((((((....)))))...))))).))))......))))))))))).)))(((((.......)))))))))))))))))(((((.(((((..(.(((((.(((......))).))))).)..))).)).)))))..........)))).............)))))))))..)))...))))))....)))...))).))).......)))))).)))))))).))))....)))))..)))))))))))))))).......((((.....))))...)))..

Thermodynamic Ensemble Prediction

.......(((((,(,{{|||||{{{,(,,..(({.(((..(({((((...((((...........)))).)).)).)))})).})},,|.,|..}}}}|||}...{,|}....,,..}}.})))|||||,,(({(({(((({{((((....((({,((,{,,,....,{|||...,....,,,.,,,..{((({..,{((({.{{,((,,.{,,,||{{{{{{{{(,,(((..,((({{((((,,,{{...,,,..({({(((({.(((.(((((((((({,(((((....)))))...,.,||.}}}}))}}|,}}}.,,,.|{{{{{{...,........((({{......))}}}.............,...}}}}}}|))}}}))),}}}..},}....)))))...))))),,...)))..)))))))))))......)),),)),))))))}},||}|||||},|}|||||}|||}}}|{{{||{.,||,{|{.{{|{||{||.,,.}))}}))))))),}}}}}}}}....,|||||||||..,,,..{||||,,....|{{{{.}},.},|.,,,,,,||||},,}}}}}},,.,,}}....}}}}}..})})}},,}}}})))),.....}}}}}....,}}.)})))))}.