Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_006685.4

Sequence Length

732 nt

GC Content

0.4740

ACCUUUAUUUGCCGUCUUUCAACUGGCAAGAGUCAUUUUGACCAGCAGAUUAAUCAACUGUAAGACAGAUCCUCACACAAAGAGGCAACUGAAAGGAUGAAAUCACUGACUUGGAUCUUGGGCCUUUGGGCUCUUGCAGCGUGUUUCACACCUGGUGAGAGUCAAAGAGGCCCCAGGGGACCAUAUCCACCUGGACCGCUGGCUCCUCCUCAACCUUUUGGCCCAGGAUUUGUUCCACCACCUCCUCCUCCACCCUAUGGUCCAGGGAGAAUCCCACCUCCUCCUCCCGCACCCUAUGGUCCAGGGAUAUUUCCACCACCCCCUCCUCAACCCUAAGGUCCACCACUCCAUCCUGAUGCCCCAGGUUAUCCACAGCCUCCUUCCCGACCAAGACCCUAUCCACCUGGACCUCCAUUUUUCCCUGUAAAUUCUCCAACUGAUCCUACCCUCCCUACUCCUGCACCCCAAAUAUGAACAACUGCAGCAGGUGCCACCACCACCACAAAAGACACCACUACCCUUGUAACUACUGCUUCUACUACCCAAAAUAUGAAUUCCAACACUGCUUCCAAGAGACAUUUACAUAAAAUUGCUUCCAUUUUUGGAUGAGAAUGAAAAAUUCCAAAAGUGCUGAGCUUUGGGGAGAAAUAAUCUUAGAAAGAAAUUGUAGAAAAAACCCAUGCAGACAUAACAUUUAUACCAAUGAGGCAAAAAUAAAGAAUUGAGCACCAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-162.3 kcal/mol

Ensemble Metrics

Free Energy: -177.71

Frequency: 0.0000

Diversity: 159.44

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((((((((.((((((..(((((((((....))))).))))(((.........))).....(((.(((((.......)))).).)))..((((.((.......((..(((((((((((((....(((((((((((.((((...)))))).)))))))))...((((..((((.((.(((........))).)).))))..))))...........))))))))))))).)).......)).)))).........(((((((((((........))).............((.(((((..((((............................(((.............((((......)))).............))))))))))))))..........))))))))...((((((((((((((((((((........................(((((.................)))))..((((....))))........................(((.....))).......................................)))).))))))........((((.((((((((((..............))))))))))..))))...)))))))))).......))))))...((((...........)))).......((((......)))).))))..))))))).............

Thermodynamic Ensemble Prediction

..(((((((((((.((((((..(((((((((....))))).)))),{(,,,......|||,...,|||.,((((.......)))).,.}}}..(((({({.......{,..{(((((((((((({({.(((((((((((.((((...))))))},))))))))..}||||,,|{{({((,{{(,,,,...,|||{||,,}||..}}}}.....,,....))}}})))},,||..,.......}}.},,,.........||{,,,(((((..............}}}}}..,,}...,))||}|||||},,.,,,....................,}))}}},......,,,|||{......}|||{|......,}}}},,,,...,,....}......,,...,}))},,...{(((((((((((((((((((.....,..................(((((.................)))))..((((....}}})........,{..............||,.....,},.,................|............,.......)))).)))))),.......((((.((((((((((..............))))))))))..))))..,))))))))})..}}|..))))))..,((((,..........)))),......{{{{......}))).))))}.,)))))).............