Basic Information

Symbol
circRAPGEF6
RNA Class
circRNA
Alias
Rap Guanine Nucleotide Exchange Factor 6 RA-GEF-2 PDZ-GEF2 PDZGEF2 PDZ Domain Containing Guanine Nucleotide Exchange Factor (GEF) 2 PDZ Domain-Containing Guanine Nucleotide Exchange Factor 2 Rap Guanine Nucleotide Exchange Factor (GEF) 6 PDZ Domain-Containing Guanine Nucleotide Exchange Factor I KIA001LB RAGEF2
Location (GRCh37)
5:130759766-130970853 UCSC Genome Browser
Location (GRCh38)
5:131424073-131635160
UCSC Genome Browser Search in Marker Scope
Host gene
RAPGEF6
Host category
mRNA
Forensic tag(s)
Drug abuse diagnoses
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_RAPGEF6_0009400 Exon-Exon chr5:130791494-130791705 chr5:131455801-131456012 212 nt 0.3774
hsa_RAPGEF6_0009500 Exon-Exon chr5:130791494-130808437 chr5:131455801-131472744 1010 nt 0.3891
hsa_RAPGEF6_0009600 Exon-Exon chr5:130791494-130828478 chr5:131455801-131492785 1564 nt 0.3887
hsa_RAPGEF6_0009700 Exon-Exon chr5:130791494-130831353 chr5:131455801-131495660 108 nt 0.3241
hsa_RAPGEF6_0009800 Exon-Exon chr5:130791494-130846184 chr5:131455801-131510491 184 nt 0.4457
hsa_RAPGEF6_0009900 Exon-Exon chr5:130791494-130857214 chr5:131455801-131521521 522 nt 0.4215
hsa_RAPGEF6_0009300 Intron-Exon-Intron chr5:130791494-130931528 chr5:131455801-131595835 250 nt 0.2920
hsa_RAPGEF6_0010400 Exon-Exon chr5:130797398-130799974 chr5:131461705-131464281 625 nt 0.3680
hsa_RAPGEF6_0010500 Exon-Exon chr5:130797398-130815446 chr5:131461705-131479753 1039 nt 0.3840
hsa_RAPGEF6_0010600 Exon-Exon chr5:130797398-130828478 chr5:131461705-131492785 1352 nt 0.3905
Showing 121 to 130 of 253 entries
Forensic Context

A study in mice demonstrated that the circRAPGEF6 was differentially expressed in methamphetamine-treated primary cortical neurons, with RNA sequencing indicating up-regulation, though qRT-PCR validation showed an opposite expression pattern [Li et al. DOI:10.1016/J.Neulet.2019.02.032].