Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0007400 Exon-Exon chr16:12142229-12162989 chr16:12048372-12069132 820 nt 0.5280
hsa_SNX29_0007600 Exon-Exon chr16:12142229-12172772 chr16:12048372-12078915 89 nt 0.5506
hsa_SNX29_0007700 Exon-Exon chr16:12142390-12220553 chr16:12048533-12126696 806 nt 0.5397
hsa_SNX29_0007800 Intron-Exon chr16:12144814-12146916 chr16:12050957-12053059 2103 nt 0.4693
hsa_chr16_0016800 Intergenic-Intergenic chr16:12144823-12146887 chr16:12050966-12053030 2065 nt 0.4683
hsa_SNX29_0008000 Exon-Exon chr16:12145704-12146079 chr16:12051847-12052222 376 nt 0.4814
hsa_SNX29_0008100 Exon-Exon chr16:12145704-12172772 chr16:12051847-12078915 89 nt 0.5506
hsa_chr16_0016900 Intergenic-Intergenic chr16:12155259-12155710 chr16:12061402-12061853 452 nt 0.5841
hsa_SNX29_0008500 Exon-Exon chr16:12155385-12162989 chr16:12061528-12069132 195 nt 0.6205
hsa_SNX29_0008600 Intron-Exon-Intron chr16:12155385-12177251 chr16:12061528-12083394 245 nt 0.5959
Showing 101 to 110 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].