Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0015100 Exon-Exon chr16:12293458-12450136 chr16:12199601-12356279 304 nt 0.5197
hsa_SNX29_0015700 Exon-Exon chr16:12293468-12371893 chr16:12199611-12278036 177 nt 0.4520
hsa_chr16_0017700 Intergenic-Intergenic chr16:12302402-12303295 chr16:12208545-12209438 894 nt 0.4799
hsa_SNX29_0015900 Intron-Intron chr16:12331013-12335554 chr16:12237156-12241697 250 nt 0.4200
hsa_SNX29_0016000 Intron-Exon-Intron chr16:12334080-12371893 chr16:12240223-12278036 250 nt 0.3640
hsa_SNX29_0016100 Intron-Intron chr16:12337011-12337266 chr16:12243154-12243409 256 nt 0.5273
hsa_chr16_0017800 Intergenic-Intergenic chr16:12343669-12344537 chr16:12249812-12250680 869 nt 0.5236
hsa_SNX29_0016200 Intron-Intron chr16:12348428-12350224 chr16:12254571-12256367 1797 nt 0.4446
hsa_SNX29_0016300 Intron-Exon-Intron chr16:12366710-12371893 chr16:12272853-12278036 250 nt 0.3680
hsa_SNX29_0016400 Intron-Exon-Intron chr16:12370871-12450136 chr16:12277014-12356279 1140 nt 0.4596
Showing 181 to 190 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].