Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SPTA1_0009700 Exon-Exon chr1:158622257-158639576 chr1:158652467-158669786 417 nt 0.4868
hsa_SPTA1_0009800 Exon-Exon chr1:158622311-158623203 chr1:158652521-158653413 273 nt 0.5128
hsa_SPTA1_0010000 Exon-Exon chr1:158623064-158639576 chr1:158653274-158669786 439 nt 0.4579
hsa_SPTA1_0009900 Exon-Exon chr1:158623064-158641243 chr1:158653274-158671453 1700 nt 0.4894
hsa_SPTA1_0010100 Exon-Exon chr1:158623064-158644465 chr1:158653274-158674675 357 nt 0.5322
hsa_SPTA1_0010200 Exon-Exon chr1:158624401-158656327 chr1:158654611-158686537 44 nt 0.3636
hsa_SPTA1_0010400 Intron-Intron chr1:158624601-158625363 chr1:158654811-158655573 249 nt 0.4819
hsa_SPTA1_0010500 Intron-Intron chr1:158624601-158625943 chr1:158654811-158656153 178 nt 0.4831
hsa_SPTA1_0010600 Intron-Exon-Intron chr1:158624601-158626446 chr1:158654811-158656656 99 nt 0.4747
hsa_SPTA1_0010700 Intron-Exon-Intron chr1:158624601-158644465 chr1:158654811-158674675 247 nt 0.4939
Showing 101 to 110 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].