Basic Information

Symbol
circTCF20
RNA Class
circRNA
Alias
Transcription Factor 20 SPBP AR1 Stromelysin-1 Platelet-Derived Growth Factor-Responsive Element Binding Protein Stromelysin-1 PDGF-Responsive Element-Binding Protein SPRE-Binding Protein Nuclear Factor SPBP TCF-20 Transcription Factor 20 (AR1) Protein AR1 KIAA0292 DDVIBA
Location (GRCh37)
22:42557340-42730570 UCSC Genome Browser
Location (GRCh38)
22:42161334-42334564
UCSC Genome Browser Search in Marker Scope
Host gene
TCF20
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_TCF20_0000400 Exon-Exon chr22:42564615-42565902 chr22:42168609-42169896 178 nt 0.6011
hsa_TCF20_0001000 Exon-Exon chr22:42565853-42575708 chr22:42169847-42179702 144 nt 0.5347
hsa_chr22_0199600 Intergenic-Intergenic chr22:42599703-42599862 chr22:42203697-42203856 160 nt 0.5250
hsa_TCF20_0001900 Exon-Exon chr22:42605657-42611347 chr22:42209651-42215341 250 nt 0.4360
hsa_TCF20_0002400 Exon-Exon chr22:42609777-42610247 chr22:42213771-42214241 471 nt 0.4947
hsa_chr22_0200600 Intergenic-Intergenic chr22:42730337-42730570 chr22:42334331-42334564 234 nt 0.5940
hsa_TCF20_0000100 Exon-Exon chr22:42557340-42565885 chr22:42161334-42169879 33 nt 0.5455
hsa_TCF20_0000200 Intron-Intron chr22:42557577-42557891 chr22:42161571-42161885 315 nt 0.5429
hsa_TCF20_0000300 Intron-Exon-Intron chr22:42563814-42566599 chr22:42167808-42170593 1676 nt 0.4773
hsa_TCF20_0000500 Intron-Exon-Intron chr22:42564615-42566336 chr22:42168609-42170330 612 nt 0.4722
Showing 1 to 10 of 55 entries
Forensic Context

A study in mice and human patients demonstrated that circRNA-Tcf20 is significantly downregulated in lung tissues and bronchoalveolar lavage fluid from subjects with sepsis-induced acute lung injury/ARDS, where it functions within a competing endogenous RNA subnetwork and its co-expressed hub genes are enriched in pathways like PI3K-Akt signaling [Xu et al. DOI:10.1080/01902148.2024.2429184].