Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SPTA1_0011100 Exon-Exon chr1:158626354-158639576 chr1:158656564-158669786 327 nt 0.4495
hsa_SPTA1_0010900 Exon-Exon chr1:158626354-158641243 chr1:158656564-158671453 1410 nt 0.4780
hsa_SPTA1_0011200 Exon-Exon chr1:158626354-158644465 chr1:158656564-158674675 93 nt 0.4516
hsa_SPTA1_0011000 Exon-Exon chr1:158626354-158646085 chr1:158656564-158676295 1941 nt 0.4786
hsa_SPTA1_0011300 Exon-Exon chr1:158626354-158647624 chr1:158656564-158677834 93 nt 0.4516
hsa_SPTA1_0011400 Exon-Exon chr1:158626354-158648324 chr1:158656564-158678534 350 nt 0.4543
hsa_SPTA1_0011500 Exon-Exon chr1:158626354-158651457 chr1:158656564-158681667 227 nt 0.4626
hsa_SPTA1_0011600 Exon-Exon chr1:158626354-158653286 chr1:158656564-158683496 437 nt 0.4577
hsa_SPTA1_0011700 Exon-Exon chr1:158626354-158655137 chr1:158656564-158685347 450 nt 0.4667
hsa_SPTA1_0011800 Intron-Exon-Intron chr1:158627262-158655137 chr1:158657472-158685347 223 nt 0.4753
Showing 111 to 120 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].