Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SPTA1_0000400 Exon-Exon chr1:158582607-158590256 chr1:158612817-158620466 349 nt 0.4756
hsa_SPTA1_0000500 Exon-Exon chr1:158582607-158606551 chr1:158612817-158636761 365 nt 0.4767
hsa_SPTA1_0000600 Exon-Exon chr1:158582607-158653286 chr1:158612817-158683496 271 nt 0.4391
hsa_SPTA1_0000700 Exon-Exon chr1:158583511-158656327 chr1:158613721-158686537 199 nt 0.4774
hsa_SPTA1_0000800 Exon-Exon chr1:158584043-158590256 chr1:158614253-158620466 242 nt 0.4793
hsa_SPTA1_0000900 Exon-Exon chr1:158585006-158606551 chr1:158615216-158636761 243 nt 0.5514
hsa_chr1_0234800 Intergenic-Intergenic chr1:158585116-158589038 chr1:158615326-158619248 157 nt 0.4586
hsa_SPTA1_0001000 Exon-Exon chr1:158585163-158589085 chr1:158615373-158619295 175 nt 0.4400
hsa_SPTA1_0001100 Exon-Exon chr1:158587327-158589124 chr1:158617537-158619334 165 nt 0.4545
hsa_SPTA1_0001200 Exon-Exon chr1:158587327-158590256 chr1:158617537-158620466 165 nt 0.4545
Showing 11 to 20 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].